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The conclusion derived from the evidence presented in the films is that Anakin is half midichlorian and half human. Midichlorians aren't mutually exclusive to Obi Wan's explanation. Midichlorians exist in living cells and allow beings to control the force. That's why Anakin is special. He's chock full of them, so he should be the best force user eva. And if Midichlorians just decided to stop doing anything the people who could use the force wouldn't be able to use it that well. The Midichlorians cut off Anakin's force supply the moment he needed it and super fueled Rey's force supply when she needed it.
As for JJ Abrams, of course the current timeline characters wouldn't know squat about Midichlorians. Most people in the galaxy don't even think Jedi existed and the force is a myth. All the people who had knowledge of the Midichlorians are dead.
Everything is in the movies. It doesn't require EU stuff or meta explanations. It all makes sense, don't fight it. Just let it in.
So why didn't Obi Wan or Yoda mention midichlorians in the OT? Because it's a cheap and easy plot device used to quickly explain that "Annie" is super powerful.
The Midichlorians cut off Anakin's force supply the moment he needed it and super fueled Rey's force supply when she needed it.
That sounds like PT-level ridiculousness.